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Preparation of sequencing reagents
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Procedure is the same for single read, PE reads 1 & 2
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Preliminary
- prepare SBS sequencing kit Box 1 (4°C) & Box 2 (-20°C);
- thaw in warm water and put on ice: IMX36, FFN36, SMX36 & separately: CMX36;
NB! always keep CMX away from other components, change gloves every time you deal with CMX
- record the lot numbers of reagents in the run list;
Prepare
NB! when prepared, store all components on ice
- prepare incorporation mix:
- add to IMX36 tube whole content of
| nick | volume | reagent |
| FFN36 | 1.75ml | Fluorescent nucleotides mix |
| SDP36 | 220µl | DNA polymerase |
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- mix by inverting;
- mix PR1, PR2, PR3, SMX36 by inverting;
- centrifuge IMX36 and SMX36: 1min, 1000x g, NT;
- sign tubes/bottles with reagent position number and record their weights
| position | nick | reagent |
| #1 | IMX | Incorporation mix |
| #2 | PW1 | Deionized water |
| #3 | SMX | Scanning mix |
| #4 | PR1 | High salt buffer |
| #5 | PR2 | Incorporation buffer |
| #6 | CMX | Cleavage mix |
| #7 | PR3 | Cleavage buffer |
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- separately:
- mix CMX36 by inverting;
- centrifuge CMX36: 1min, 1000xg, NT;
- sign tube, record weight;
- wash/change gloves;
Second-generation sequencing
URL: http://seq.zbio.net
e-mail: soldatov@molgen.mpg.de
visits:
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