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Preparation of sequencing reagents

Procedure is the same for single read, PE reads 1 & 2

Preliminary

  • prepare SBS sequencing kit Box 1 (4°C) & Box 2 (-20°C);
  • thaw in warm water and put on ice: IMX36, FFN36, SMX36 & separately: CMX36;
  • NB! always keep CMX away from other components, change gloves every time you deal with CMX
  • record the lot numbers of reagents in the run list;


Prepare

NB! when prepared, store all components on ice
  1. prepare incorporation mix:
    • add to IMX36 tube whole content of
      nickvolumereagent
      FFN361.75mlFluorescent nucleotides mix
      SDP36220µlDNA polymerase
    • mix by inverting;
  2. mix PR1, PR2, PR3, SMX36 by inverting;
  3. centrifuge IMX36 and SMX36: 1min, 1000x g, NT;
  4. sign tubes/bottles with reagent position number and record their weights
    positionnickreagent
    #1IMXIncorporation mix
    #2PW1Deionized water
    #3SMXScanning mix
    #4PR1High salt buffer
    #5PR2Incorporation buffer
    #6CMXCleavage mix
    #7PR3Cleavage buffer
  5. separately:
    • mix CMX36 by inverting;
    • centrifuge CMX36: 1min, 1000xg, NT;
    • sign tube, record weight;
    • wash/change gloves;





Second-generation sequencing
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Last modification: 09/01/09

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